Progenetix Pages and Forms¶
Variant and Positional Fields¶
Biological and Metadata¶
Age (at diagnosis)¶
Here one (or two, for a range - see image) age values can be specified using
an ISO8601 period expression (e.g.
P365D - not including time elements)
prefixed by the
age indicator, a
: separator and one of the comparators
Response Limit and Skip Pages¶
This functionality allows e.g. the limited retrieval of a subset of samples from large or general cancer types, or the "paging" through consecutive sample groups for partitioned data retrieval.
The Response Limit (API parameter
limit) sets the maximum number of returned
samples, to change it from the internal default of 20001. Typical use cases here are
the speeding-up of data visualization by selecting a smaller subset (e.g. 200) for
large expected returns, or the successive paging through large result sets.
With Skip Pages (API parameter
skip) - in combinations with a Response Limit - one can retrieve
different parts of a large response; e.g.
limit=100 will return
The [Data Visualization] button opens a new page where samples matched by the query can be visualized for their aggregated and individual CNV profiles. This includes creation & clustering of subsets (e.g. by shared PMID, NCIT code ...) as well as the visualization of clustered CNV sample plots. Optios include the selection of individual chromosomes and the addition of labels (e.g. for selected genes or custom markers).
Please see the Services & API page for more information.
Values may change. ↩